Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scfd1Q8BRF7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Gm15794-201ENSMUST00000120182 631 ntBASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Olfr129-201ENSMUST00000122318 993 ntBASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Gm17971-201ENSMUST00000190239 806 ntBASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scfd1Q8BRF7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scfd1Q8BRF7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Gm29707-201ENSMUST00000196325 491 ntBASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scfd1Q8BRF7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scfd1Q8BRF7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Gm18421-201ENSMUST00000204122 625 ntBASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scfd1Q8BRF7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scfd1Q8BRF7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scfd1Q8BRF7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms