Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rd3Q8BRE0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rd3Q8BRE0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Olfr129-201ENSMUST00000122318 993 ntBASIC17.97■□□□□ 0.47
Rd3Q8BRE0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Gm27357-201ENSMUST00000183754 135 ntBASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rd3Q8BRE0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Gm27000-201ENSMUST00000182943 842 ntBASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rd3Q8BRE0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rd3Q8BRE0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Gm24589-201ENSMUST00000116692 94 ntBASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Gm11336-201ENSMUST00000118168 334 ntBASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rd3Q8BRE0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms