Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Gm4974-201ENSMUST00000209974 875 ntBASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdhr3Q8BL00 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdhr3Q8BL00 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdhr3Q8BL00 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdhr3Q8BL00 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms