Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf38Q8BI21 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf38Q8BI21 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Gm37292-201ENSMUST00000192062 758 ntBASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf38Q8BI21 Dancr-204ENSMUST00000132389 2347 ntBASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf38Q8BI21 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Gm37856-201ENSMUST00000191634 999 ntBASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.36■□□□□ 0.21
Rnf38Q8BI21 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Gm13158-201ENSMUST00000122007 736 ntBASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf38Q8BI21 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms