Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1bQ8BH88 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Depdc1bQ8BH88 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Gm10517-202ENSMUST00000192970 758 ntBASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Gm3375-201ENSMUST00000203929 796 ntBASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Depdc1bQ8BH88 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Gm10231-201ENSMUST00000181584 441 ntBASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Gm10175-202ENSMUST00000208752 441 ntBASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Depdc1bQ8BH88 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Depdc1bQ8BH88 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Depdc1bQ8BH88 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms