Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Gm13148-201ENSMUST00000118892 745 ntBASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim6Q8BGE7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim6Q8BGE7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim6Q8BGE7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim6Q8BGE7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trim6Q8BGE7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim6Q8BGE7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim6Q8BGE7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Gm11643-201ENSMUST00000119578 864 ntBASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Mtag2-201ENSMUST00000058665 714 ntBASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim6Q8BGE7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18■□□□□ 0.47
Trim6Q8BGE7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18■□□□□ 0.47
Trim6Q8BGE7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Mir6349-201ENSMUST00000184059 97 ntBASIC18■□□□□ 0.47
Trim6Q8BGE7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18■□□□□ 0.47
Trim6Q8BGE7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18■□□□□ 0.47
Trim6Q8BGE7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim6Q8BGE7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms