Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Gm27742-201ENSMUST00000184667 60 ntBASIC16.18■□□□□ 0.18
Vrk1Q80X41 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.18■□□□□ 0.18
Vrk1Q80X41 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gm7153-201ENSMUST00000117092 455 ntBASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gm45328-201ENSMUST00000210942 917 ntBASIC16.17■□□□□ 0.18
Vrk1Q80X41 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.17■□□□□ 0.18
Vrk1Q80X41 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Vrk1Q80X41 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Gm27357-201ENSMUST00000183754 135 ntBASIC16.16■□□□□ 0.18
Vrk1Q80X41 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.16■□□□□ 0.18
Vrk1Q80X41 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk1Q80X41 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk1Q80X41 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vrk1Q80X41 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.14■□□□□ 0.17
Vrk1Q80X41 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.14■□□□□ 0.17
Vrk1Q80X41 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.14■□□□□ 0.17
Vrk1Q80X41 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vrk1Q80X41 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms