Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Gm5864-201ENSMUST00000202263 970 ntBASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Prpf40bQ80W14 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf40bQ80W14 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf40bQ80W14 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf40bQ80W14 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.51■□□□□ 0.71
Prpf40bQ80W14 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Gm24841-201ENSMUST00000158676 357 ntBASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Gm6623-201ENSMUST00000173570 544 ntBASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Idnk-204ENSMUST00000226010 1898 ntBASIC19.5■□□□□ 0.71
Prpf40bQ80W14 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Birc2-201ENSMUST00000054878 378 ntBASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf40bQ80W14 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf40bQ80W14 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf40bQ80W14 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms