Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3tc2Q80VA5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3tc2Q80VA5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sh3tc2Q80VA5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3tc2Q80VA5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3tc2Q80VA5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Gm5867-201ENSMUST00000063197 592 ntBASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3tc2Q80VA5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Gm43514-201ENSMUST00000198852 424 ntBASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Actl10-202ENSMUST00000226583 1501 ntBASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3tc2Q80VA5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Olfr129-201ENSMUST00000122318 993 ntBASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Gm45328-201ENSMUST00000210942 917 ntBASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3tc2Q80VA5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Gm6443-201ENSMUST00000203599 874 ntBASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3tc2Q80VA5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3tc2Q80VA5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Sh3tc2Q80VA5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3tc2Q80VA5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3tc2Q80VA5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms