Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Gm6623-201ENSMUST00000173570 544 ntBASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rab3gap1Q80UJ7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3gap1Q80UJ7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rab3gap1Q80UJ7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3gap1Q80UJ7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Rab3gap1Q80UJ7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rab3gap1Q80UJ7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rab3gap1Q80UJ7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab3gap1Q80UJ7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Phf7-203ENSMUST00000226565 1971 ntBASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3gap1Q80UJ7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab3gap1Q80UJ7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rab3gap1Q80UJ7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab3gap1Q80UJ7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.55■□□□□ 0.88
Rab3gap1Q80UJ7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms