Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm26308-201ENSMUST00000157768 69 ntBASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm7506-201ENSMUST00000207758 815 ntBASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Mir3113-201ENSMUST00000175478 76 ntBASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Vps13bQ80TY5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Vps13bQ80TY5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Gm11780-201ENSMUST00000136880 516 ntBASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Mir8117-201ENSMUST00000184773 107 ntBASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Fam105a-203ENSMUST00000226170 3043 ntBASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Vps13bQ80TY5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms