Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.65■□□□□ 0.26
Pcdh19Q80TF3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh19Q80TF3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh19Q80TF3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh19Q80TF3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms