Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38bQ80SY5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Birc2-201ENSMUST00000054878 378 ntBASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38bQ80SY5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Mir8098-201ENSMUST00000184011 137 ntBASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38bQ80SY5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Gm34391-201ENSMUST00000203706 907 ntBASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf38bQ80SY5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Gm11950-201ENSMUST00000121615 838 ntBASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Gm18733-201ENSMUST00000173950 856 ntBASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf38bQ80SY5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prpf38bQ80SY5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms