Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Gm11643-201ENSMUST00000119578 864 ntBASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Gm12382-201ENSMUST00000122005 922 ntBASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Gm18666-201ENSMUST00000190039 958 ntBASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Gm37292-201ENSMUST00000192062 758 ntBASIC16.16■□□□□ 0.18
Otub1Q7TQI3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Otub1Q7TQI3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Otub1Q7TQI3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Otub1Q7TQI3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Gm43183-201ENSMUST00000200632 547 ntBASIC16.14■□□□□ 0.17
Otub1Q7TQI3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Otub1Q7TQI3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Gm10698-201ENSMUST00000182663 604 ntBASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Otub1Q7TQI3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Gm5643-201ENSMUST00000117081 966 ntBASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Otub1Q7TQI3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms