Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx4Q7TNK1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Gm10493-201ENSMUST00000097270 612 ntBASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx4Q7TNK1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx4Q7TNK1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx4Q7TNK1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms