Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx55Q6ZPL9 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.3■□□□□ 0.68
Ddx55Q6ZPL9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx55Q6ZPL9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx55Q6ZPL9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ddx55Q6ZPL9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx55Q6ZPL9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ddx55Q6ZPL9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ddx55Q6ZPL9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx55Q6ZPL9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx55Q6ZPL9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms