Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Gm8587-201ENSMUST00000076538 843 ntBASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a1Q6X893 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a1Q6X893 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc44a1Q6X893 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc44a1Q6X893 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc44a1Q6X893 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc44a1Q6X893 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Gm27389-201ENSMUST00000183622 195 ntBASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a1Q6X893 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Phf7-203ENSMUST00000226565 1971 ntBASIC19.63■□□□□ 0.73
Slc44a1Q6X893 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a1Q6X893 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Gm18115-201ENSMUST00000221209 621 ntBASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a1Q6X893 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms