Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc1Q6TDU8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Gm12382-201ENSMUST00000122005 922 ntBASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc1Q6TDU8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc1Q6TDU8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Gm715-201ENSMUST00000117865 831 ntBASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.21■□□□□ 0.83
Casc1Q6TDU8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms