Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.26□□□□□ -0.13
Rif1Q6PR54 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rif1Q6PR54 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rif1Q6PR54 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.25□□□□□ -0.13
Rif1Q6PR54 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.25□□□□□ -0.13
Rif1Q6PR54 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.25□□□□□ -0.13
Rif1Q6PR54 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rif1Q6PR54 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.25□□□□□ -0.13
Rif1Q6PR54 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rif1Q6PR54 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rif1Q6PR54 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.24□□□□□ -0.13
Rif1Q6PR54 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.24□□□□□ -0.13
Rif1Q6PR54 Gm27494-201ENSMUST00000184735 189 ntBASIC14.24□□□□□ -0.13
Rif1Q6PR54 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.24□□□□□ -0.13
Rif1Q6PR54 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rif1Q6PR54 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Gm37025-201ENSMUST00000195159 829 ntBASIC14.23□□□□□ -0.13
Rif1Q6PR54 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Gm5866-201ENSMUST00000177881 973 ntBASIC14.23□□□□□ -0.13
Rif1Q6PR54 Mir8117-201ENSMUST00000184773 107 ntBASIC14.23□□□□□ -0.13
Rif1Q6PR54 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.23□□□□□ -0.13
Rif1Q6PR54 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rif1Q6PR54 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms