Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Rprl3-201ENSMUST00000157400 290 ntBASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Gm29707-201ENSMUST00000196325 491 ntBASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Snrnp40Q6PE01 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Gm6376-201ENSMUST00000209407 580 ntBASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Snrnp40Q6PE01 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm13312-201ENSMUST00000119631 718 ntBASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm44450-201ENSMUST00000199528 114 ntBASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Snrnp40Q6PE01 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Gm7862-201ENSMUST00000121461 292 ntBASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Gm6296-201ENSMUST00000222599 943 ntBASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Snrnp40Q6PE01 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms