Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf220Q6PDX6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf220Q6PDX6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf220Q6PDX6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rnf220Q6PDX6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf220Q6PDX6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms