Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim37Q6PCX9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim37Q6PCX9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim37Q6PCX9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim37Q6PCX9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Gm37935-201ENSMUST00000192012 982 ntBASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Gm5864-201ENSMUST00000202263 970 ntBASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Gm34391-201ENSMUST00000203706 907 ntBASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim37Q6PCX9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim37Q6PCX9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Mir1668-201ENSMUST00000184114 107 ntBASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim37Q6PCX9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.77■□□□□ 0.59
Trim37Q6PCX9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim37Q6PCX9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim37Q6PCX9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms