Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.6■□□□□ 0.09
Smarcd3Q6P9Z1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smarcd3Q6P9Z1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Smarcd3Q6P9Z1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Smarcd3Q6P9Z1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smarcd3Q6P9Z1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Gm11249-201ENSMUST00000117071 859 ntBASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Gm10602-201ENSMUST00000098239 609 ntBASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcd3Q6P9Z1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Gm29257-201ENSMUST00000186115 639 ntBASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd3Q6P9Z1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd3Q6P9Z1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd3Q6P9Z1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms