Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scube1Q6NZL8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scube1Q6NZL8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scube1Q6NZL8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scube1Q6NZL8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scube1Q6NZL8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scube1Q6NZL8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scube1Q6NZL8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.33■□□□□ 0.21
Scube1Q6NZL8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scube1Q6NZL8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scube1Q6NZL8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scube1Q6NZL8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube1Q6NZL8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scube1Q6NZL8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube1Q6NZL8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms