Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.77■□□□□ 0.6
Krt39Q6IFX4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt39Q6IFX4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt39Q6IFX4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt39Q6IFX4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Krt39Q6IFX4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt39Q6IFX4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.77■□□□□ 0.59
Krt39Q6IFX4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Gm4974-201ENSMUST00000209974 875 ntBASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt39Q6IFX4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Krt39Q6IFX4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.74■□□□□ 0.59
Krt39Q6IFX4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt39Q6IFX4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms