Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt42Q6IFX2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Krt42Q6IFX2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Krt42Q6IFX2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Krt42Q6IFX2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Krt42Q6IFX2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Krt42Q6IFX2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Gm2399-201ENSMUST00000104944 225 ntBASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt42Q6IFX2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt42Q6IFX2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Krt42Q6IFX2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.42■□□□□ 0.38
Krt42Q6IFX2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt42Q6IFX2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt42Q6IFX2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt42Q6IFX2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt42Q6IFX2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Krt42Q6IFX2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms