Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm12260-201ENSMUST00000122447 411 ntBASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.78■□□□□ 0.76
Scaf8Q6DID3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf8Q6DID3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Gm13312-201ENSMUST00000119631 718 ntBASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Mir5126-201ENSMUST00000175513 77 ntBASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.77■□□□□ 0.76
Scaf8Q6DID3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Rprl3-201ENSMUST00000157400 290 ntBASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf8Q6DID3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf8Q6DID3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Gm14822-201ENSMUST00000122247 291 ntBASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf8Q6DID3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Gm44450-201ENSMUST00000199528 114 ntBASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Gm18421-201ENSMUST00000204122 625 ntBASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf8Q6DID3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Scaf8Q6DID3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.72■□□□□ 0.75
Scaf8Q6DID3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf8Q6DID3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf8Q6DID3 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.72■□□□□ 0.75
Scaf8Q6DID3 Psmb5-202ENSMUST00000227257 622 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms