Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cgnl1Q6AW69 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cgnl1Q6AW69 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cgnl1Q6AW69 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cgnl1Q6AW69 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cgnl1Q6AW69 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cgnl1Q6AW69 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cgnl1Q6AW69 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cgnl1Q6AW69 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cgnl1Q6AW69 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Gm715-201ENSMUST00000117865 831 ntBASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cgnl1Q6AW69 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Cgnl1Q6AW69 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cgnl1Q6AW69 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Gm7791-201ENSMUST00000219066 539 ntBASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cgnl1Q6AW69 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cgnl1Q6AW69 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cgnl1Q6AW69 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Cgnl1Q6AW69 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cgnl1Q6AW69 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cgnl1Q6AW69 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms