Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.05■□□□□ 0
SpenQ62504 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.05■□□□□ 0
SpenQ62504 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SpenQ62504 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SpenQ62504 Gm11336-201ENSMUST00000118168 334 ntBASIC15.05■□□□□ -0
SpenQ62504 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.05■□□□□ -0
SpenQ62504 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.05■□□□□ -0
SpenQ62504 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.05■□□□□ -0
SpenQ62504 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.05■□□□□ -0
SpenQ62504 Gm10576-201ENSMUST00000191927 825 ntBASIC15.05■□□□□ -0
SpenQ62504 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.05■□□□□ -0
SpenQ62504 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.05■□□□□ -0
SpenQ62504 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.04■□□□□ -0
SpenQ62504 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SpenQ62504 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SpenQ62504 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SpenQ62504 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.04■□□□□ -0
SpenQ62504 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.04■□□□□ -0
SpenQ62504 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.04■□□□□ -0
SpenQ62504 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SpenQ62504 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.04■□□□□ -0
SpenQ62504 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.04■□□□□ -0
SpenQ62504 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SpenQ62504 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SpenQ62504 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Gm27321-201ENSMUST00000185021 205 ntBASIC15.03■□□□□ -0
SpenQ62504 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.03■□□□□ -0
SpenQ62504 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.03■□□□□ -0
SpenQ62504 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SpenQ62504 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.03■□□□□ -0
SpenQ62504 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.03■□□□□ -0
SpenQ62504 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.03■□□□□ -0
SpenQ62504 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SpenQ62504 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SpenQ62504 Rprl3-201ENSMUST00000157400 290 ntBASIC15.02■□□□□ -0
SpenQ62504 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SpenQ62504 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SpenQ62504 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.02■□□□□ -0
SpenQ62504 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SpenQ62504 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SpenQ62504 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SpenQ62504 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.02□□□□□ -0.01
SpenQ62504 Gm44450-201ENSMUST00000199528 114 ntBASIC15.02□□□□□ -0.01
SpenQ62504 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.02□□□□□ -0.01
SpenQ62504 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SpenQ62504 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.01□□□□□ -0.01
SpenQ62504 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SpenQ62504 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SpenQ62504 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SpenQ62504 Gm13418-201ENSMUST00000119097 944 ntBASIC15.01□□□□□ -0.01
SpenQ62504 Gm15173-201ENSMUST00000122049 433 ntBASIC15.01□□□□□ -0.01
SpenQ62504 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.01□□□□□ -0.01
SpenQ62504 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SpenQ62504 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SpenQ62504 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms