Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.4■□□□□ 0.38
Six1Q62231 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Six1Q62231 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.4■□□□□ 0.38
Six1Q62231 Gm9731-201ENSMUST00000209480 747 ntBASIC17.4■□□□□ 0.38
Six1Q62231 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Six1Q62231 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six1Q62231 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.39■□□□□ 0.37
Six1Q62231 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.39■□□□□ 0.37
Six1Q62231 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Gm15378-201ENSMUST00000121894 207 ntBASIC17.39■□□□□ 0.37
Six1Q62231 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Six1Q62231 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Six1Q62231 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Six1Q62231 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.39■□□□□ 0.37
Six1Q62231 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six1Q62231 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.38■□□□□ 0.37
Six1Q62231 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.38■□□□□ 0.37
Six1Q62231 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.38■□□□□ 0.37
Six1Q62231 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six1Q62231 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Six1Q62231 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.37■□□□□ 0.37
Six1Q62231 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.37■□□□□ 0.37
Six1Q62231 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.37■□□□□ 0.37
Six1Q62231 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Six1Q62231 Gm12085-201ENSMUST00000119263 940 ntBASIC17.37■□□□□ 0.37
Six1Q62231 Gm7638-201ENSMUST00000121348 967 ntBASIC17.37■□□□□ 0.37
Six1Q62231 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.37■□□□□ 0.37
Six1Q62231 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six1Q62231 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.36■□□□□ 0.37
Six1Q62231 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.36■□□□□ 0.37
Six1Q62231 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six1Q62231 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Six1Q62231 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Six1Q62231 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Il3ra-202ENSMUST00000223589 738 ntBASIC17.35■□□□□ 0.37
Six1Q62231 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six1Q62231 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six1Q62231 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms