Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.96■□□□□ 0.79
Scn9aQ62205 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.96■□□□□ 0.79
Scn9aQ62205 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Scn9aQ62205 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn9aQ62205 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
Scn9aQ62205 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.95■□□□□ 0.78
Scn9aQ62205 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.95■□□□□ 0.78
Scn9aQ62205 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn9aQ62205 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scn9aQ62205 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.95■□□□□ 0.78
Scn9aQ62205 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scn9aQ62205 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scn9aQ62205 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn9aQ62205 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn9aQ62205 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.94■□□□□ 0.78
Scn9aQ62205 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn9aQ62205 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn9aQ62205 Gm14494-201ENSMUST00000118786 435 ntBASIC19.94■□□□□ 0.78
Scn9aQ62205 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Scn9aQ62205 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Gm25990-201ENSMUST00000102440 86 ntBASIC19.93■□□□□ 0.78
Scn9aQ62205 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Scn9aQ62205 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.93■□□□□ 0.78
Scn9aQ62205 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.93■□□□□ 0.78
Scn9aQ62205 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Scn9aQ62205 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn9aQ62205 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Gm12260-201ENSMUST00000122447 411 ntBASIC19.92■□□□□ 0.78
Scn9aQ62205 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.92■□□□□ 0.78
Scn9aQ62205 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.92■□□□□ 0.78
Scn9aQ62205 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Scn9aQ62205 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scn9aQ62205 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.92■□□□□ 0.78
Scn9aQ62205 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.92■□□□□ 0.78
Scn9aQ62205 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scn9aQ62205 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.92■□□□□ 0.78
Scn9aQ62205 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.92■□□□□ 0.78
Scn9aQ62205 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.92■□□□□ 0.78
Scn9aQ62205 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn9aQ62205 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Scn9aQ62205 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Scn9aQ62205 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn9aQ62205 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms