Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VcanQ62059 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.91■□□□□ 0.14
VcanQ62059 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VcanQ62059 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.91■□□□□ 0.14
VcanQ62059 Gm43767-201ENSMUST00000198933 381 ntBASIC15.91■□□□□ 0.14
VcanQ62059 Gm20949-201ENSMUST00000206478 952 ntBASIC15.91■□□□□ 0.14
VcanQ62059 Gm44872-201ENSMUST00000207864 420 ntBASIC15.91■□□□□ 0.14
VcanQ62059 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.91■□□□□ 0.14
VcanQ62059 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.91■□□□□ 0.14
VcanQ62059 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VcanQ62059 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.91■□□□□ 0.14
VcanQ62059 Gm6550-201ENSMUST00000187574 993 ntBASIC15.9■□□□□ 0.14
VcanQ62059 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VcanQ62059 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.9■□□□□ 0.14
VcanQ62059 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.9■□□□□ 0.14
VcanQ62059 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VcanQ62059 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Gm25990-201ENSMUST00000102440 86 ntBASIC15.9■□□□□ 0.14
VcanQ62059 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.9■□□□□ 0.14
VcanQ62059 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.9■□□□□ 0.14
VcanQ62059 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VcanQ62059 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.89■□□□□ 0.13
VcanQ62059 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.89■□□□□ 0.13
VcanQ62059 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VcanQ62059 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.89■□□□□ 0.13
VcanQ62059 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.89■□□□□ 0.13
VcanQ62059 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.89■□□□□ 0.13
VcanQ62059 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VcanQ62059 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.88■□□□□ 0.13
VcanQ62059 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
VcanQ62059 Gm37025-201ENSMUST00000195159 829 ntBASIC15.88■□□□□ 0.13
VcanQ62059 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VcanQ62059 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VcanQ62059 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VcanQ62059 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.87■□□□□ 0.13
VcanQ62059 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.87■□□□□ 0.13
VcanQ62059 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.87■□□□□ 0.13
VcanQ62059 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.87■□□□□ 0.13
VcanQ62059 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.87■□□□□ 0.13
VcanQ62059 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VcanQ62059 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.87■□□□□ 0.13
VcanQ62059 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.87■□□□□ 0.13
VcanQ62059 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
VcanQ62059 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.87■□□□□ 0.13
VcanQ62059 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VcanQ62059 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Gm13418-201ENSMUST00000119097 944 ntBASIC15.86■□□□□ 0.13
VcanQ62059 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.86■□□□□ 0.13
VcanQ62059 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.86■□□□□ 0.13
VcanQ62059 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VcanQ62059 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.86■□□□□ 0.13
VcanQ62059 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.86■□□□□ 0.13
VcanQ62059 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms