Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13□□□□□ -0.33
Notch3Q61982 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13□□□□□ -0.33
Notch3Q61982 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Notch3Q61982 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Notch3Q61982 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13□□□□□ -0.33
Notch3Q61982 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13□□□□□ -0.33
Notch3Q61982 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Notch3Q61982 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13□□□□□ -0.33
Notch3Q61982 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13□□□□□ -0.33
Notch3Q61982 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13□□□□□ -0.33
Notch3Q61982 Mir1668-201ENSMUST00000184114 107 ntBASIC13□□□□□ -0.33
Notch3Q61982 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13□□□□□ -0.33
Notch3Q61982 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13□□□□□ -0.33
Notch3Q61982 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13□□□□□ -0.33
Notch3Q61982 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Notch3Q61982 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.99□□□□□ -0.33
Notch3Q61982 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.99□□□□□ -0.33
Notch3Q61982 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.99□□□□□ -0.33
Notch3Q61982 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Notch3Q61982 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Notch3Q61982 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Notch3Q61982 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Gm7153-201ENSMUST00000117092 455 ntBASIC12.99□□□□□ -0.33
Notch3Q61982 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.99□□□□□ -0.33
Notch3Q61982 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Notch3Q61982 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Notch3Q61982 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Notch3Q61982 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Notch3Q61982 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Notch3Q61982 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.98□□□□□ -0.33
Notch3Q61982 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.98□□□□□ -0.33
Notch3Q61982 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Notch3Q61982 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Notch3Q61982 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms