Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.02■□□□□ 0.63
Col11a1Q61245 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.02■□□□□ 0.63
Col11a1Q61245 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col11a1Q61245 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Gm13418-201ENSMUST00000119097 944 ntBASIC19.01■□□□□ 0.63
Col11a1Q61245 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.01■□□□□ 0.63
Col11a1Q61245 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col11a1Q61245 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col11a1Q61245 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a1Q61245 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19■□□□□ 0.63
Col11a1Q61245 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19■□□□□ 0.63
Col11a1Q61245 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Gm4459-201ENSMUST00000118750 468 ntBASIC19■□□□□ 0.63
Col11a1Q61245 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19■□□□□ 0.63
Col11a1Q61245 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a1Q61245 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.99■□□□□ 0.63
Col11a1Q61245 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Auts2-212ENSMUST00000178555 309 ntBASIC18.99■□□□□ 0.63
Col11a1Q61245 Gm27397-201ENSMUST00000184997 107 ntBASIC18.99■□□□□ 0.63
Col11a1Q61245 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col11a1Q61245 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.99■□□□□ 0.63
Col11a1Q61245 AV026068-213ENSMUST00000223675 1171 ntBASIC18.99■□□□□ 0.63
Col11a1Q61245 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col11a1Q61245 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col11a1Q61245 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col11a1Q61245 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.98■□□□□ 0.63
Col11a1Q61245 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.98■□□□□ 0.63
Col11a1Q61245 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Col11a1Q61245 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col11a1Q61245 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col11a1Q61245 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.98■□□□□ 0.63
Col11a1Q61245 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col11a1Q61245 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col11a1Q61245 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.98■□□□□ 0.63
Col11a1Q61245 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.98■□□□□ 0.63
Col11a1Q61245 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Gm10576-201ENSMUST00000191927 825 ntBASIC18.97■□□□□ 0.63
Col11a1Q61245 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col11a1Q61245 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.97■□□□□ 0.63
Col11a1Q61245 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.97■□□□□ 0.63
Col11a1Q61245 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.97■□□□□ 0.63
Col11a1Q61245 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.97■□□□□ 0.63
Col11a1Q61245 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.97■□□□□ 0.63
Col11a1Q61245 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col11a1Q61245 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col11a1Q61245 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col11a1Q61245 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Col11a1Q61245 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col11a1Q61245 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col11a1Q61245 Gm8097-201ENSMUST00000117903 829 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms