Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sdf4Q61112 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sdf4Q61112 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.2■□□□□ 0.34
Sdf4Q61112 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Sdf4Q61112 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Gm18958-201ENSMUST00000174258 762 ntBASIC17.2■□□□□ 0.34
Sdf4Q61112 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.2■□□□□ 0.34
Sdf4Q61112 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sdf4Q61112 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sdf4Q61112 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdf4Q61112 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Sdf4Q61112 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sdf4Q61112 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.19■□□□□ 0.34
Sdf4Q61112 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.19■□□□□ 0.34
Sdf4Q61112 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sdf4Q61112 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.19■□□□□ 0.34
Sdf4Q61112 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdf4Q61112 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdf4Q61112 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.18■□□□□ 0.34
Sdf4Q61112 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.18■□□□□ 0.34
Sdf4Q61112 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sdf4Q61112 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdf4Q61112 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdf4Q61112 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Sdf4Q61112 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.17■□□□□ 0.34
Sdf4Q61112 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.17■□□□□ 0.34
Sdf4Q61112 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sdf4Q61112 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sdf4Q61112 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.17■□□□□ 0.34
Sdf4Q61112 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdf4Q61112 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdf4Q61112 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.16■□□□□ 0.34
Sdf4Q61112 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.16■□□□□ 0.34
Sdf4Q61112 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.16■□□□□ 0.34
Sdf4Q61112 Gm10252-201ENSMUST00000209541 832 ntBASIC17.16■□□□□ 0.34
Sdf4Q61112 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.16■□□□□ 0.34
Sdf4Q61112 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Sdf4Q61112 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms