Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Prdm1Q60636 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prdm1Q60636 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.82■□□□□ 0.76
Prdm1Q60636 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prdm1Q60636 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Prdm1Q60636 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Prdm1Q60636 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prdm1Q60636 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prdm1Q60636 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.81■□□□□ 0.76
Prdm1Q60636 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Prdm1Q60636 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Prdm1Q60636 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.81■□□□□ 0.76
Prdm1Q60636 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Prdm1Q60636 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.81■□□□□ 0.76
Prdm1Q60636 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.81■□□□□ 0.76
Prdm1Q60636 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.81■□□□□ 0.76
Prdm1Q60636 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.81■□□□□ 0.76
Prdm1Q60636 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prdm1Q60636 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.8■□□□□ 0.76
Prdm1Q60636 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
Prdm1Q60636 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.8■□□□□ 0.76
Prdm1Q60636 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.8■□□□□ 0.76
Prdm1Q60636 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.8■□□□□ 0.76
Prdm1Q60636 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prdm1Q60636 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prdm1Q60636 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Prdm1Q60636 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.8■□□□□ 0.76
Prdm1Q60636 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Prdm1Q60636 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Prdm1Q60636 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Gm7213-201ENSMUST00000215977 950 ntBASIC19.79■□□□□ 0.76
Prdm1Q60636 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Prdm1Q60636 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm1Q60636 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prdm1Q60636 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.78■□□□□ 0.76
Prdm1Q60636 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Prdm1Q60636 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Prdm1Q60636 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.78■□□□□ 0.76
Prdm1Q60636 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prdm1Q60636 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.78■□□□□ 0.76
Prdm1Q60636 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Prdm1Q60636 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.78■□□□□ 0.76
Prdm1Q60636 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Prdm1Q60636 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm1Q60636 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.77■□□□□ 0.76
Prdm1Q60636 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.77■□□□□ 0.76
Prdm1Q60636 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.77■□□□□ 0.76
Prdm1Q60636 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm1Q60636 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Prdm1Q60636 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Prdm1Q60636 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm1Q60636 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm1Q60636 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm1Q60636 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm1Q60636 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm1Q60636 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prdm1Q60636 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Prdm1Q60636 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms