Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm715-201ENSMUST00000117865 831 ntBASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Trim38Q5SZ99 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim38Q5SZ99 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim38Q5SZ99 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim38Q5SZ99 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.58■□□□□ 0.41
Trim38Q5SZ99 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Gm27011-201ENSMUST00000182352 972 ntBASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim38Q5SZ99 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.57■□□□□ 0.4
Trim38Q5SZ99 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim38Q5SZ99 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim38Q5SZ99 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim38Q5SZ99 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms