Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm8587-201ENSMUST00000076538 843 ntBASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav2Q5R1I9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav2Q5R1I9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.54□□□□□ -0.24
Trav2Q5R1I9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Gm8969-201ENSMUST00000199694 526 ntBASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav2Q5R1I9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav2Q5R1I9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Trav2Q5R1I9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms