Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-3Q5R1C3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Gm12251-201ENSMUST00000117893 792 ntBASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-3Q5R1C3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-3Q5R1C3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-3Q5R1C3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Gm43173-201ENSMUST00000202246 593 ntBASIC12.74□□□□□ -0.37
Trav3-3Q5R1C3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms