Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf20Q5DTM8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf20Q5DTM8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Gm7791-201ENSMUST00000219066 539 ntBASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf20Q5DTM8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf20Q5DTM8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf20Q5DTM8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms