Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.56■□□□□ 0.08
Urb1Q571H0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Urb1Q571H0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Urb1Q571H0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Urb1Q571H0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.56■□□□□ 0.08
Urb1Q571H0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Urb1Q571H0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.56■□□□□ 0.08
Urb1Q571H0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Urb1Q571H0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Urb1Q571H0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Gm13884-201ENSMUST00000118103 829 ntBASIC15.55■□□□□ 0.08
Urb1Q571H0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Mir5126-201ENSMUST00000175513 77 ntBASIC15.55■□□□□ 0.08
Urb1Q571H0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Urb1Q571H0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Urb1Q571H0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.54■□□□□ 0.08
Urb1Q571H0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.54■□□□□ 0.08
Urb1Q571H0 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.54■□□□□ 0.08
Urb1Q571H0 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.54■□□□□ 0.08
Urb1Q571H0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Urb1Q571H0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Urb1Q571H0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Urb1Q571H0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.54■□□□□ 0.08
Urb1Q571H0 Rps4l-201ENSMUST00000071745 943 ntBASIC15.54■□□□□ 0.08
Urb1Q571H0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.53■□□□□ 0.08
Urb1Q571H0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Urb1Q571H0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Urb1Q571H0 Gm12895-201ENSMUST00000122214 226 ntBASIC15.52■□□□□ 0.08
Urb1Q571H0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.52■□□□□ 0.08
Urb1Q571H0 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.52■□□□□ 0.08
Urb1Q571H0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Urb1Q571H0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Urb1Q571H0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Urb1Q571H0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.52■□□□□ 0.08
Urb1Q571H0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Urb1Q571H0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Urb1Q571H0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.52■□□□□ 0.08
Urb1Q571H0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Urb1Q571H0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Urb1Q571H0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Urb1Q571H0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Urb1Q571H0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Urb1Q571H0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms