Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Bdp1Q571C7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.22■□□□□ 0.35
Bdp1Q571C7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Bdp1Q571C7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.22■□□□□ 0.35
Bdp1Q571C7 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.22■□□□□ 0.35
Bdp1Q571C7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Bdp1Q571C7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.21■□□□□ 0.35
Bdp1Q571C7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Bdp1Q571C7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Bdp1Q571C7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.21■□□□□ 0.34
Bdp1Q571C7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Bdp1Q571C7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Bdp1Q571C7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Mir8117-201ENSMUST00000184773 107 ntBASIC17.2■□□□□ 0.34
Bdp1Q571C7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Bdp1Q571C7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Gm44430-201ENSMUST00000203376 995 ntBASIC17.19■□□□□ 0.34
Bdp1Q571C7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Bdp1Q571C7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Bdp1Q571C7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Gm7506-201ENSMUST00000207758 815 ntBASIC17.18■□□□□ 0.34
Bdp1Q571C7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.18■□□□□ 0.34
Bdp1Q571C7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.18■□□□□ 0.34
Bdp1Q571C7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Bdp1Q571C7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.16■□□□□ 0.34
Bdp1Q571C7 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.16■□□□□ 0.34
Bdp1Q571C7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Bdp1Q571C7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms