Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Rarb-207ENSMUST00000225921 2756 ntBASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf38aQ4FK66 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Gm45328-201ENSMUST00000210942 917 ntBASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf38aQ4FK66 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf38aQ4FK66 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Prpf38aQ4FK66 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Gm18115-201ENSMUST00000221209 621 ntBASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38aQ4FK66 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38aQ4FK66 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Gm27742-201ENSMUST00000184667 60 ntBASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38aQ4FK66 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.73■□□□□ 0.75
Prpf38aQ4FK66 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms