Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim80Q3V061 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim80Q3V061 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.54■□□□□ 0.4
Trim80Q3V061 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Gm5643-201ENSMUST00000117081 966 ntBASIC17.54■□□□□ 0.4
Trim80Q3V061 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trim80Q3V061 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim80Q3V061 Gm2559-201ENSMUST00000201323 363 ntBASIC17.54■□□□□ 0.4
Trim80Q3V061 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trim80Q3V061 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim80Q3V061 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim80Q3V061 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.53■□□□□ 0.4
Trim80Q3V061 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Gm12896-201ENSMUST00000118430 226 ntBASIC17.53■□□□□ 0.4
Trim80Q3V061 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim80Q3V061 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim80Q3V061 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim80Q3V061 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim80Q3V061 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim80Q3V061 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trim80Q3V061 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim80Q3V061 Gm27275-201ENSMUST00000184318 272 ntBASIC17.52■□□□□ 0.4
Trim80Q3V061 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim80Q3V061 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim80Q3V061 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim80Q3V061 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim80Q3V061 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim80Q3V061 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim80Q3V061 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim80Q3V061 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim80Q3V061 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim80Q3V061 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.51■□□□□ 0.39
Trim80Q3V061 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim80Q3V061 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim80Q3V061 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trim80Q3V061 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim80Q3V061 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim80Q3V061 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim80Q3V061 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim80Q3V061 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim80Q3V061 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim80Q3V061 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim80Q3V061 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim80Q3V061 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim80Q3V061 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim80Q3V061 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms