Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
Cdkl5Q3UTQ8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cdkl5Q3UTQ8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdkl5Q3UTQ8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.64■□□□□ 0.74
Cdkl5Q3UTQ8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Gm27000-201ENSMUST00000182943 842 ntBASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkl5Q3UTQ8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Gm5417-201ENSMUST00000079706 384 ntBASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl5Q3UTQ8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl5Q3UTQ8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl5Q3UTQ8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdkl5Q3UTQ8 Gm37055-201ENSMUST00000191866 133 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms