Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp30Q3UN04 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp30Q3UN04 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp30Q3UN04 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp30Q3UN04 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.04■□□□□ 0.32
Usp30Q3UN04 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Gm11336-201ENSMUST00000118168 334 ntBASIC17.03■□□□□ 0.32
Usp30Q3UN04 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp30Q3UN04 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Gm8969-201ENSMUST00000199694 526 ntBASIC17.02■□□□□ 0.32
Usp30Q3UN04 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.02■□□□□ 0.32
Usp30Q3UN04 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp30Q3UN04 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp30Q3UN04 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp30Q3UN04 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp30Q3UN04 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.02■□□□□ 0.31
Usp30Q3UN04 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Usp30Q3UN04 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gm18115-201ENSMUST00000221209 621 ntBASIC17.01■□□□□ 0.31
Usp30Q3UN04 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp30Q3UN04 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp30Q3UN04 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17■□□□□ 0.31
Usp30Q3UN04 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17■□□□□ 0.31
Usp30Q3UN04 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp30Q3UN04 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Usp30Q3UN04 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp30Q3UN04 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms