Protein–RNA interactions for Protein: Q3UM18

Lsg1, Large subunit GTPase 1 homolog, mousemouse

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1Q3UM18 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsg1Q3UM18 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsg1Q3UM18 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Lsg1Q3UM18 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsg1Q3UM18 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsg1Q3UM18 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lsg1Q3UM18 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Lsg1Q3UM18 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.46■□□□□ 0.22
Lsg1Q3UM18 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lsg1Q3UM18 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Gm20760-201ENSMUST00000179197 648 ntBASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsg1Q3UM18 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Gm12527-201ENSMUST00000117967 564 ntBASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsg1Q3UM18 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms