Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Olfr129-201ENSMUST00000122318 993 ntBASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg7Q3ULF4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Gm15794-201ENSMUST00000120182 631 ntBASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Spg7Q3ULF4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.18■□□□□ 0.82
Spg7Q3ULF4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Gm7153-201ENSMUST00000117092 455 ntBASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg7Q3ULF4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg7Q3ULF4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Gm29707-201ENSMUST00000196325 491 ntBASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Gm44450-201ENSMUST00000199528 114 ntBASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spg7Q3ULF4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms