Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Khdc4Q3TCX3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Gm7638-201ENSMUST00000121348 967 ntBASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Gm29791-202ENSMUST00000207888 369 ntBASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Khdc4Q3TCX3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Gm13401-201ENSMUST00000117074 291 ntBASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Gm33142-201ENSMUST00000193913 867 ntBASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Khdc4Q3TCX3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Gm24841-201ENSMUST00000158676 357 ntBASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Khdc4Q3TCX3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms