Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Nhej1Q3KNJ2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nhej1Q3KNJ2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Nhej1Q3KNJ2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Nhej1Q3KNJ2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhej1Q3KNJ2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Gm12382-201ENSMUST00000122005 922 ntBASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Gm10517-202ENSMUST00000192970 758 ntBASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhej1Q3KNJ2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nhej1Q3KNJ2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhej1Q3KNJ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms